Index B | C | D | E | F | G | I | L | M | O | P | R | S | T | V B BFXPipeline (class in bionty_base) bionty_base module BioSample (class in bionty_base) C CellLine (class in bionty_base) CellMarker (class in bionty_base) CellType (class in bionty_base) D DevelopmentalStage (class in bionty_base) df() (bionty_base.BFXPipeline method) (bionty_base.Organism method) (bionty_base.PublicOntology method) diff() (bionty_base.PublicOntology method) Disease (class in bionty_base) display_available_sources() (in module bionty_base) display_currently_used_sources() (in module bionty_base) Drug (class in bionty_base) E Ethnicity (class in bionty_base) ExperimentalFactor (class in bionty_base) F fields (bionty_base.BFXPipeline attribute) (bionty_base.BioSample attribute) (bionty_base.CellLine attribute) (bionty_base.CellMarker attribute) (bionty_base.CellType attribute) (bionty_base.DevelopmentalStage attribute) (bionty_base.Disease attribute) (bionty_base.Drug attribute) (bionty_base.Ethnicity attribute) (bionty_base.ExperimentalFactor attribute) (bionty_base.Gene attribute) (bionty_base.Organism attribute) (bionty_base.Pathway attribute) (bionty_base.Phenotype attribute) (bionty_base.Protein attribute) (bionty_base.PublicOntology attribute) (bionty_base.Tissue attribute) G Gene (class in bionty_base) get_term() (bionty_base.Ontology method) I inspect() (bionty_base.PublicOntology method) L lookup() (bionty_base.PublicOntology method) M map_legacy_ids() (bionty_base.Gene method) map_synonyms() (bionty_base.PublicOntology method) module bionty_base O Ontology (class in bionty_base) organism (bionty_base.BFXPipeline attribute) (bionty_base.BioSample attribute) (bionty_base.CellLine attribute) (bionty_base.CellMarker attribute) (bionty_base.CellType attribute) (bionty_base.DevelopmentalStage attribute) (bionty_base.Disease attribute) (bionty_base.Drug attribute) (bionty_base.Ethnicity attribute) (bionty_base.ExperimentalFactor attribute) (bionty_base.Gene attribute) (bionty_base.Organism attribute) (bionty_base.Pathway attribute) (bionty_base.Phenotype attribute) (bionty_base.Protein attribute) (bionty_base.PublicOntology attribute) (bionty_base.Tissue attribute) Organism (class in bionty_base) P Pathway (class in bionty_base) Phenotype (class in bionty_base) Protein (class in bionty_base) PublicOntology (class in bionty_base) PublicOntologyField (class in bionty_base) R reset_sources() (in module bionty_base) S search() (bionty_base.PublicOntology method) settings (in module bionty_base) source (bionty_base.BFXPipeline attribute) (bionty_base.BioSample attribute) (bionty_base.CellLine attribute) (bionty_base.CellMarker attribute) (bionty_base.CellType attribute) (bionty_base.DevelopmentalStage attribute) (bionty_base.Disease attribute) (bionty_base.Drug attribute) (bionty_base.Ethnicity attribute) (bionty_base.ExperimentalFactor attribute) (bionty_base.Gene attribute) (bionty_base.Organism attribute) (bionty_base.Pathway attribute) (bionty_base.Phenotype attribute) (bionty_base.Protein attribute) (bionty_base.PublicOntology attribute) (bionty_base.Tissue attribute) standardize() (bionty_base.PublicOntology method) T Tissue (class in bionty_base) to_df() (bionty_base.Ontology method) to_pronto() (bionty_base.ExperimentalFactor method) (bionty_base.PublicOntology method) V validate() (bionty_base.PublicOntology method) version (bionty_base.BFXPipeline attribute) (bionty_base.BioSample attribute) (bionty_base.CellLine attribute) (bionty_base.CellMarker attribute) (bionty_base.CellType attribute) (bionty_base.DevelopmentalStage attribute) (bionty_base.Disease attribute) (bionty_base.Drug attribute) (bionty_base.Ethnicity attribute) (bionty_base.ExperimentalFactor attribute) (bionty_base.Gene attribute) (bionty_base.Organism attribute) (bionty_base.Pathway attribute) (bionty_base.Phenotype attribute) (bionty_base.Protein attribute) (bionty_base.PublicOntology attribute) (bionty_base.Tissue attribute)